The detailed information of tRNA gene sequence


Sequence ID>SRA1000719
Genome IDSRR001046.181417
Search identical group
Phylum/ClassSolar Salterns, microbial fraction from low salinity saltern in San Diego, CA (SRP000138)
Species
Start position on genome 107
End posion on genome 31
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
nncggcacaT
tRNA gene sequence 
GGCCCCGTGGCTCAACTGGATAGAGCAATCCCCTCCTAAGGGATAGGTTGCAGGTTCAAG
TCCTGCCGGGTCACCNa
Downstream region at tRNA end position 
aaaacccaat
Secondary structure (Cloverleaf model)
>SRA1000719	Arg	CCT
                   T      CCNa aaaacccaat
                     G   A
                     G - C
                     C   T
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     C G T C C     A
      C A A        G      | | | | |     A
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     AGGTT
                    A - T
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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