The detailed information of tRNA gene sequence


Sequence ID>SRA1000728
Genome IDSRR001046.216048
Search identical group
Phylum/ClassSolar Salterns, microbial fraction from low salinity saltern in San Diego, CA (SRP000138)
Species
Start position on genome 115
End posion on genome 24
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaccgccagC
tRNA gene sequence 
GGAGACGTGGCCGAGTGGTCGAAGGCGCTCCCCTGCTAAGGGAGTAGGCGGGAAACCGTC
TCGAGGGTTCGAATCCCTTCGTCTCCGACC
Downstream region at tRNA end position 
Aaaatactct
Secondary structure (Cloverleaf model)
>SRA1000728	Ser	GCT
                   C      GACC Aaaatactct
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T T C C C     A
      T G A        G      + | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TAGGCGGGAAACCGTCTC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK