The detailed information of tRNA gene sequence


Sequence ID>SRA1000735
Genome IDSRR001046.234589
Search identical group
Phylum/ClassSolar Salterns, microbial fraction from low salinity saltern in San Diego, CA (SRP000138)
Species
Start position on genome 22
End posion on genome 95
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
gagtcgggtt
tRNA gene sequence 
GCCCTCGTAGCTCAGCGGATAGAGCAGAAGACTTCTAATCTTTTGGTCGCAGGTTCGATT
CCTGCCGAGGGCGCnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1000735	Arg	TCT
                   t      GCnn nnnnnnnnnn
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A
                     C - G
                     G - C          T T
                    T     C G T C C     A
      C G A        A      | | | | |     G
    G       C T C G       G C A G G     C
    G       | | | |                 T T
    A       G A G C
      T A          A     TGGTC
                    G + T
                    A - T
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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