The detailed information of tRNA gene sequence


Sequence ID>SRA1000738
Genome IDSRR001046.240564
Search identical group
Phylum/ClassSolar Salterns, microbial fraction from low salinity saltern in San Diego, CA (SRP000138)
Species
Start position on genome 27
End posion on genome 103
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
cgcggcacat
tRNA gene sequence 
GGCCCCGTGGCTCAACTGGATAGAGCAATCCCCTCCTAAGGGATAGGTTGCAGGTTCAAG
TCCTGCCGGGGTCACCA
Downstream region at tRNA end position 
aaaaaanccc
Secondary structure (Cloverleaf model)
>SRA1000738	Arg	CCT
                   t      ACCA aaaaaanccc
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     C G T C C     A
      C A A        G      | | | | |     A
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     AGGTT
                    A - T
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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