The detailed information of tRNA gene sequence


Sequence ID>SRA1000742
Genome IDSRR001046.244679
Search identical group
Phylum/ClassSolar Salterns, microbial fraction from low salinity saltern in San Diego, CA (SRP000138)
Species
Start position on genome 41
End posion on genome 117
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
cggtttaata
tRNA gene sequence 
CGGGGTGTGGCCTAGTCCGGTAAGGCGCCTGTTTTGGGTACAGGAGATCGTAGGTTCAAA
TCCTACCACCCCGACCA
Downstream region at tRNA end position 
tcctcaaaga
Secondary structure (Cloverleaf model)
>SRA1000742	Pro	TGG
                   a      ACCA tcctcaaaga
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C A T C C     A
      T G A        G      | | | | |     A
    C       T C C G       G T A G G     C
    C       | | | |                 T T
    G       A G G C
      G T A        G     AGATC
                    C - G
                    C - G
                    T - A
                    G - C
                    T - A
                  T       T
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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