The detailed information of tRNA gene sequence


Sequence ID>SRA1000751
Genome IDSRR001046.256528
Search identical group
Phylum/ClassSolar Salterns, microbial fraction from low salinity saltern in San Diego, CA (SRP000138)
Species
Start position on genome 43
End posion on genome 131
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position
ggcgctgacC
tRNA gene sequence
GGAGGGTTGGCTGAGCGGTCGAAAGCGGCGGTCTTGAAAACCGTTGTGGGGTCACACCCA
CCGGGGGTTCGAATCCCTCACCCTCCGCnn
Downstream region at tRNA end position
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1000751	Ser	TGA
                   C      GCnn nnnnnnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     T - A          T A
                    T     C T C C C     A
      C G A        G      | + | | |     G
    G       G T C G       G G G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     TGTGGGGTCACACCCACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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