The detailed information of tRNA gene sequence


Sequence ID>SRA1000752
Genome IDSRR001046.258566
Search identical group
Phylum/ClassSolar Salterns, microbial fraction from low salinity saltern in San Diego, CA (SRP000138)
Species
Start position on genome 13
End posion on genome 89
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ggcctcggtc
tRNA gene sequence 
CGGGGCGTAGCGCAGCCTGGTAGCGCACCTGTTTTGGGAACAGGGGGTCGTGAGTTCGAA
TCTCTCCGCCCCGACCA
Downstream region at tRNA end position 
catccgtctt
Secondary structure (Cloverleaf model)
>SRA1000752	Pro	TGG
                   c      ACCA catccgtctt
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C T C T C     A
      C G A        A      |   | | |     G
    C       C G C G       G T G A G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    T - A
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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