The detailed information of tRNA gene sequence


Sequence ID>SRA1000753
Genome IDSRR001046.262804
Search identical group
Phylum/ClassSolar Salterns, microbial fraction from low salinity saltern in San Diego, CA (SRP000138)
Species
Start position on genome 102
End posion on genome 16
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
ngtttctttt
tRNA gene sequence 
GGGGAGATACTCAAGCGGCCAACCGAGGACAGACTGTAAATCTGTTGGTTTTCACCTTCG
CAGGTTCGAATCCTGCTCTCCCCACTA
Downstream region at tRNA end position 
taattgcaaa
Secondary structure (Cloverleaf model)
>SRA1000753	Tyr	GTA
                   t      ACTA taattgcaaa
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C G T C C     A
    G C G A        A      | | | | |     G
  G         A C T C       G C A G G     C
  C           | | |                 T T
  C         C G A G
    A A C          G     TGGTTTTCACCTTC
                    A - T
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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