The detailed information of tRNA gene sequence


Sequence ID>SRA1000756
Genome IDSRR001046.273195
Search identical group
Phylum/ClassSolar Salterns, microbial fraction from low salinity saltern in San Diego, CA (SRP000138)
Species
Start position on genome 10
End posion on genome 93
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position
ngggaatcac
tRNA gene sequence
GCGGAAGTGGTGGAACGGCAGACACGCTGCGCTTAGGACGCAGTGCCTTCGGGCGTGCGG
GTTCAACTCCCGCCTTCCGCACCC
Downstream region at tRNA end position
gtttacgtgc
Secondary structure (Cloverleaf model)
>SRA1000756	Leu	TAG
                   c      ACCC gtttacgtgc
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C          T C
                    T     C G C C C     A
      C A A        G      | | | | |     A
    G       G G T G       G C G G G     C
    G         | | |                 T T
    C       A C A C
      A G          G     TGCCTTCGGGCGT
                    C - G
                    T - A
                    G - C
                    C - G
                    G - C
                  C       A
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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