The detailed information of tRNA gene sequence


Sequence ID>SRA1000777
Genome IDSRR001047.35545
Search identical group
Phylum/ClassTilapia Farm, viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000139)
Species
Start position on genome 98
End posion on genome 24
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
ntcctttggt
tRNA gene sequence 
CTAAGTGTAGCCGAGTGGTGAGGCGCTTGTTTCGGGAACAAGACAATGCAGGTTCGATTC
CTGTCACTTAGACCA
Downstream region at tRNA end position 
aaggatattg
Secondary structure (Cloverleaf model)
>SRA1000777	Pro	CGG
                   t      ACCA aaggatattg
                     C - G
                     T - A
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C          T T
                    T     T G T C C     A
        G A        A      + | | | |     G
      T     G C C G       G C A G G     C
      G       | | |                 T T
      G     A G G C
        T G        G     ACAAT
                    C - G
                    T - A
                    T - A
                    G - C
                    T - A
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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