The detailed information of tRNA gene sequence


Sequence ID>SRA1000780
Genome IDSRR001047.41023
Search identical group
Phylum/ClassTilapia Farm, viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000139)
Species
Start position on genome 36
End posion on genome 109
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
actaaaattt
tRNA gene sequence 
GGACTCTTAGCTCAGTCGGAAGAGCGAAAAGCTGTTAACTTTTAGGTCATTGGTTCGAAT
CCAATAGGGTCCTCnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1000780	Asn	GTT
                   t      TCnn nnnnnnnnnn
                     G - C
                     G - C
                     A - T
                     C - G
                     T + G
                     C - G
                     T - A          T A
                    T     T A A C C     A
      T G A        A      | | | | |     G
    C       C T C G       A T T G G     C
    G       | | | |                 T T
    G       G A G C
      A A          G     AGGTC
                    A - T
                    A - T
                    A - T
                    A - T
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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