The detailed information of tRNA gene sequence


Sequence ID>SRA1000781
Genome IDSRR001047.41820
Search identical group
Phylum/ClassTilapia Farm, viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000139)
Species
Start position on genome 9
End posion on genome 84
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position
nnagtgtgta
tRNA gene sequence
ATTCGGGTAGCTCAATAGGTAGAGCGTCGGTCTCCAAAACCGAAGGTTGCAGGTTCAATT
CCTGCCCCGTTTGCCA
Downstream region at tRNA end position
gtttcggcag
Secondary structure (Cloverleaf model)
>SRA1000781	Trp	CCA
                   a      GCCA gtttcggcag
                     A - T
                     T   T
                     T   T
                     C - G
                     G - C
                     G - C
                     G - C          T T
                    T     C G T C C     A
      T A A        A      | | | | |     A
    A       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTT
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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