The detailed information of tRNA gene sequence


Sequence ID>SRA1000786
Genome IDSRR001047.60388
Search identical group
Phylum/ClassTilapia Farm, viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000139)
Species
Start position on genome 12
End posion on genome 87
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
agctatttta
tRNA gene sequence 
GCTGCTATAGCTCATCAGGCAGAGCGCCACACTTGTAATGTGGATGTGCGGGGTTCGAGT
CCTCGTGGCAGCACCA
Downstream region at tRNA end position 
gttttcnnnn
Secondary structure (Cloverleaf model)
>SRA1000786	Thr	TGT
                   a      ACCA gttttcnnnn
                     G - C
                     C - G
                     T - A
                     G - C
                     C - G
                     T + G
                     A - T          T G
                    T     G C T C C     A
      C T A        A      | | + | |     G
    A       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     ATGTG
                    C - G
                    C - G
                    A - T
                    C - G
                    A - T
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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