The detailed information of tRNA gene sequence


Sequence ID>SRA1000788
Genome IDSRR001047.63096
Search identical group
Phylum/ClassTilapia Farm, viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000139)
Species
Start position on genome 83
End posion on genome 12
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
tttgtatttc
tRNA gene sequence 
GCCACCTTAGCACAGCGGTAGTGCGGATGTTTTGTAAACAGCAGGTCGTCAGTTCGAATC
TGGCAGGTGGCTtgt
Downstream region at tRNA end position 
tcatcgtgnn
Secondary structure (Cloverleaf model)
>SRA1000788	Thr	TGT
                   c      Ttgt tcatcgtgnn
                     G - C
                     C - G
                     C - G
                     A - T
                     C - G
                     C - G
                     T - A          T A
                    T     C G G T C     A
        G A        A      | + | | |     G
      C     C A C G       G T C A G     C
      G     | | | |                 T T
      G     G T G C
        T A        G     AGGTC
                    G - C
                    A   G
                    T - A
                    G - C
                    T - A
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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