The detailed information of tRNA gene sequence


Sequence ID>SRA1000794
Genome IDSRR001047.86283
Search identical group
Phylum/ClassTilapia Farm, viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000139)
Species
Start position on genome 11
End posion on genome 84
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position
taatttaatt
tRNA gene sequence
GGGGGTTTGGTGTAATGGTAGCACCGCAGATTTTGATTCTGTTAGCGAGGGTTCGACTCC
CTCATCCCCTGCCA
Downstream region at tRNA end position
attttgtctg
Secondary structure (Cloverleaf model)
>SRA1000794	Gln	TTG
                   t      GCCA attttgtctg
                     G + T
                     G - C
                     G - C
                     G - C
                     G - C
                     T   T
                     T - A          T C
                    T     C T C C C     A
        A A        G      | | | | |     G
      T     T G T G       G A G G G     C
      G     + | | |                 T T
      G     G C A C
        T A        C     TAGC
                    G + T
                    C - G
                    A - T
                    G - C
                    A - T
                  T       T
                  T       A
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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