The detailed information of tRNA gene sequence


Sequence ID>SRA1000798
Genome IDSRR001047.95842
Search identical group
Phylum/ClassTilapia Farm, viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000139)
Species
Start position on genome 21
End posion on genome 96
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
cgcataggtT
tRNA gene sequence 
GCTGCCGTAGCTCAGTGGTAGAGCACCGCTTTGGTAAAGCGGAGGCCGAGAGTTCGATCC
TCTCCGGCAGCACCC
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1000798	Thr	GGT
                   T      ACCC nnnnnnnnnn
                     G - C
                     C - G
                     T - A
                     G - C
                     C - G
                     C - G
                     G - C          C T
                    T     C T C T C     A
        G A        A      | | | | |     G
      T     C T C G       G A G A G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     AGGCC
                    C - G
                    C - G
                    G - C
                    C - G
                    T - A
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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