The detailed information of tRNA gene sequence


Sequence ID>SRA1000806
Genome IDSRR001047.116614
Search identical group
Phylum/ClassTilapia Farm, viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000139)
Species
Start position on genome 28
End posion on genome 99
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ggagccatga
tRNA gene sequence 
CGTGGGGTAGAGCAGCGGTAGCTCGTGTGACTCATAATCACAAGGTCGCAGGTTCAAATC
CTGCCCCCACTAnnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1000806	Met	CAT
                   a      Annn nnnnnnnnnn
                     C   T
                     G - C
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G T C C     A
        G A        A      | | | | |     A
      C     C G A G       G C A G G     C
      G     | | | |                 T T
      G     G C T C
        T A        G     AGGTC
                    T - A
                    G - C
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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