The detailed information of tRNA gene sequence


Sequence ID>SRA1000807
Genome IDSRR001047.123764
Search identical group
Phylum/ClassTilapia Farm, viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000139)
Species
Start position on genome 35
End posion on genome 111
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
tcacaaaaaa
tRNA gene sequence 
GTCTGGGTGGTGAAACTGGAAAACACAACAAGTTTAAGCCTTGTAAGCTGCGGGTTCGAC
TCCCGTCCCAGATACAA
Downstream region at tRNA end position 
taatgcnnnn
Secondary structure (Cloverleaf model)
>SRA1000807	Leu	TAA
                   a      ACAA taatgcnnnn
                     G + T
                     T - A
                     C - G
                     T - A
                     G - C
                     G - C
                     G - C          T C
                    T     T G C C C     A
      C A A        G      + | | | |     G
    T       A G T G       G C G G G     C
    G         | | |                 T T
    G       A C A C
      A A A        A     AAGCT
                    A - T
                    C - G
                    A - T
                    A - T
                    G - C
                  T       C
                  T       G
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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