The detailed information of tRNA gene sequence


Sequence ID>SRA1000833
Genome IDSRR001047.201197
Search identical group
Phylum/ClassTilapia Farm, viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000139)
Species
Start position on genome 28
End posion on genome 103
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
caccttatat
tRNA gene sequence 
GCGGAAGTAGCTCAATTGGTAGAGCTCCTGCCTTCCAAGCAGGTTGTTGCGGGTTCGAGT
CCCGTCTTCCGCTCTA
Downstream region at tRNA end position 
gaannnnnnn
Secondary structure (Cloverleaf model)
>SRA1000833	Gly	TCC
                   t      TCTA gaannnnnnn
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C          T G
                    T     T G C C C     A
      T A A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          T     TTGTT
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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