The detailed information of tRNA gene sequence


Sequence ID>SRA1000846
Genome IDSRR001047.260198
Search identical group
Phylum/ClassTilapia Farm, viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000139)
Species
Start position on genome 10
End posion on genome 83
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
ntaatttaat
tRNA gene sequence 
TGGGGGTTTGTGTAATGGTAGCACCGCAGATTTTGATTCTGTTAGCGAGGGTTCGACTCC
CTCATCCCCTGCCA
Downstream region at tRNA end position 
attttgtctg
Secondary structure (Cloverleaf model)
>SRA1000846	Gln	TTG
                   t      GCCA attttgtctg
                     T   T
                     G - C
                     G - C
                     G - C
                     G - C
                     G + T
                     T - A          T C
                    T     C T C C C     A
        A A        T      | | | | |     G
      T     T G T G       G A G G G     C
      G     + | | |                 T T
      G     G C A C
        T A        C     TAGC
                    G + T
                    C - G
                    A - T
                    G - C
                    A - T
                  T       T
                  T       A
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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