The detailed information of tRNA gene sequence


Sequence ID>SRA1000856
Genome IDSRR001047.297981
Search identical group
Phylum/ClassTilapia Farm, viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000139)
Species
Start position on genome 13
End posion on genome 100
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
tccctgcaac
tRNA gene sequence 
GGGGATGCGGTGCAGTTGGTGAGGCACGGCAGACTGTAAATCTGTTACTTCTACGTTGAG
TTGGTTCGAATCCAACCACTCCCCACC
Downstream region at tRNA end position 
Aacgacccct
Secondary structure (Cloverleaf model)
>SRA1000856	Tyr	GTA
                   c      CACC Aacgacccct
                     G - C
                     G - C
                     G - C
                     G + T
                     A   C
                     T - A
                     G - C          T A
                    C     C A A C C     A
    T T G A        G      | | | | |     G
  G         C G T G       G T T G G     C
  G         | | | |                 T T
  T         G C A C
    G A G          G     TACTTCTACGTTGA
                    G + T
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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