The detailed information of tRNA gene sequence


Sequence ID>SRA1000859
Genome IDSRR001047.305119
Search identical group
Phylum/ClassTilapia Farm, viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000139)
Species
Start position on genome 34
End posion on genome 110
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
agattcttaa
tRNA gene sequence
CCCCCTGTAGCTCAATCGGTTAGAGCGGACGACTCATAATCGTTAGGTTATCGGTTCAAG
TCCGGTCGGGGGGACCA
Downstream region at tRNA end position
atatttcnnn
Secondary structure (Cloverleaf model)
>SRA1000859	Met	CAT
                   a      ACCA atatttcnnn
                     C - G
                     C - G
                     C - G
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     T G G C C     A
      T A A        A      | + | | |     A
    C       C T C G       A T C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTT
                    G + T
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK