The detailed information of tRNA gene sequence


Sequence ID>SRA1000870
Genome IDSRR001048.113886
Search identical group
Phylum/ClassLine Islands Corals, microbial fraction from water of Palmyra (SRP000140)
Species
Start position on genome 32
End posion on genome 104
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
atataacagc
tRNA gene sequence 
AGGCCTTTAGCTCAGTTGGTAGAGCGCGTGCCTTACAAGCACGATGTCATCGGTTCGATC
CCGGTAGGGCCTAnnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1000870	Val	TAC
                   c      Annn nnnnnnnnnn
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     T - A          C T
                    T     T G G C C     A
      T G A        A      | + | | |     G
    T       C T C G       A T C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     ATGTC
                    C - G
                    G - C
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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