The detailed information of tRNA gene sequence


Sequence ID>SRA1000873
Genome IDSRR001048.144029
Search identical group
Phylum/ClassLine Islands Corals, microbial fraction from water of Palmyra (SRP000140)
Species
Start position on genome 102
End posion on genome 11
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
nngcacttca
tRNA gene sequence 
GGAGAGTTGGCAGAGCCCGGTTTAATGCACCTGACTTGAAATCAGACGTGGGGTCAAACC
CACCGGGGGTTCGAATCCCTCACTCTCCGCCA
Downstream region at tRNA end position 
tattatgaaa
Secondary structure (Cloverleaf model)
>SRA1000873	Ser	TGA
                   a      GCCA tattatgaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C T C C C     A
    C C G A        G      | + | | |     G
  C         G A C G       G G G G G     C
  G           | | |                 T T
  G         A T G C
    T T T A        A     CGTGGGGTCAAACCCACC
                    C   A
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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