The detailed information of tRNA gene sequence


Sequence ID>SRA1000876
Genome IDSRR001048.172166
Search identical group
Phylum/ClassLine Islands Corals, microbial fraction from water of Palmyra (SRP000140)
Species
Start position on genome 41
End posion on genome 115
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
tggattataT
tRNA gene sequence 
AGCCCGGTCGTCTAGAGGCCTAGGACATCGCCCTTTCACGGCGAAAACACGGGTTCGAAA
CCCGTCCGGGGTAAac
Downstream region at tRNA end position 
tattaaaann
Secondary structure (Cloverleaf model)
>SRA1000876	Glu	TTC
                   T      AAac tattaaaann
                     A - T
                     G   G
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          A A
                    T     T G C C C     A
      A G A        C      | | | | |     G
    G       T C T G       A C G G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        A     AAAC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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