The detailed information of tRNA gene sequence


Sequence ID>SRA1000881
Genome IDSRR001048.250392
Search identical group
Phylum/ClassLine Islands Corals, microbial fraction from water of Palmyra (SRP000140)
Species
Start position on genome 101
End posion on genome 28
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
nnnngaagtc
tRNA gene sequence 
CAAGGTGTGGCGCAGCTTGGTAGCGCATCTGTTTTGGGAACAGAAGGTCATAGGTTCAAA
TCCTATCACCTTGAtga
Downstream region at tRNA end position 
ggaataaaag
Secondary structure (Cloverleaf model)
>SRA1000881	Pro	TGG
                   c      Atga ggaataaaag
                     C - G
                     A - T
                     A - T
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T A T C C     A
      C G A        G      | | | | |     A
    T       C G C G       A T A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     AGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    T - A
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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