The detailed information of tRNA gene sequence


Sequence ID>SRA1000882
Genome IDSRR001048.257805
Search identical group
Phylum/ClassLine Islands Corals, microbial fraction from water of Palmyra (SRP000140)
Species
Start position on genome 40
End posion on genome 114
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
aanggacaga
tRNA gene sequence 
TGGGGTGTAGCCAAGTGGTAAGGCAACGGTTTTTGGTATCGTGTACCGTAGGTTCGAATC
CTACCACCCCAGCCA
Downstream region at tRNA end position 
tataaatata
Secondary structure (Cloverleaf model)
>SRA1000882	Gln	TTG
                   a      GCCA tataaatata
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C A T C C     A
        G A        A      | | | | |     G
      T     A C C G       G T A G G     C
      G       | | |                 T T
      G     A G G C
        T A        A     GTACC
                    A - T
                    C - G
                    G - C
                    G + T
                    T - A
                  T       T
                  T       G
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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