The detailed information of tRNA gene sequence


Sequence ID>SRA1000883
Genome IDSRR001048.280904
Search identical group
Phylum/ClassLine Islands Corals, microbial fraction from water of Palmyra (SRP000140)
Species
Start position on genome 23
End posion on genome 96
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
gattcatatt
tRNA gene sequence 
GCTGGCGTAGCTCAGCTGGTAGAGCAGCTGATTTGTAATCAGCAGGTCGGGGGTTCAAGT
CCCTTCGCCAGCTCnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1000883	Thr	TGT
                   t      TCnn nnnnnnnnnn
                     G - C
                     C - G
                     T - A
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     T T C C C     A
      C G A        A      + + | | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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