The detailed information of tRNA gene sequence


Sequence ID>SRA1000888
Genome IDSRR001048.314435
Search identical group
Phylum/ClassLine Islands Corals, microbial fraction from water of Palmyra (SRP000140)
Species
Start position on genome 98
End posion on genome 18
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
ctttcttcta
tRNA gene sequence 
AGTAATGTGGCGAAACGGTAGACGCGTTTGATTTAGGATCAAATTCTTTCGGGATTAAGA
GTTCAAGTCTCTTCATTGCTAtat
Downstream region at tRNA end position 
ggtagcgttt
Secondary structure (Cloverleaf model)
>SRA1000888	Leu	TAG
                   a      Atat ggtagcgttt
                     A - T
                     G - C
                     T + G
                     A - T
                     A - T
                     T - A
                     G - C          T G
                    T     T T C T C     A
      C A A        G      | | | | |     A
    G       A G C G       A A G A G     C
    G         | | |                 T T
    T       A C G C
      A G          G     TTCTTTCGGGATT
                    T - A
                    T - A
                    T - A
                    G - C
                    A - T
                  T       A
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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