The detailed information of tRNA gene sequence


Sequence ID>SRA1000895
Genome IDSRR001049.15413
Search identical group
Phylum/ClassLine Islands Corals, viral fraction from water of Palmyra (SRP000141)
Species
Start position on genome 105
End posion on genome 19
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
atataattag
tRNA gene sequence 
GGCTAAGTGGTGGAATTGGTATACACAGCAGTCTCAAAAACTGCCGCCAATAATGGCTTG
TCGGTTCGAGTCCGACCTTAGCTACCA
Downstream region at tRNA end position 
aataaagggg
Secondary structure (Cloverleaf model)
>SRA1000895	Leu	CAA
                   g      ACCA aataaagggg
                     G + T
                     G - C
                     C - G
                     T - A
                     A - T
                     A - T
                     G - C          T G
                    T     C A G C C     A
      T A A        G      | | | | |     G
    T       G G T G       G T C G G     C
    G         | | |                 T T
    G       A C A C
      T A T        A     CGCCAATAATGGCTT
                    G - C
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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