The detailed information of tRNA gene sequence


Sequence ID>SRA1000898
Genome IDSRR001049.31117
Search identical group
Phylum/ClassLine Islands Corals, viral fraction from water of Palmyra (SRP000141)
Species
Start position on genome 106
End posion on genome 34
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
nnnnnntcaa
tRNA gene sequence 
GGAACTATAGCTCAATTGGTAGAGCAACCGGCTTTTAACCGGTTGGTTCAGGGTTCGAGT
CCCTGTGGTTCCAtct
Downstream region at tRNA end position 
tgccacctta
Secondary structure (Cloverleaf model)
>SRA1000898	Lys	TTT
                   a      Atct tgccacctta
                     G - C
                     G - C
                     A - T
                     A - T
                     C - G
                     T + G
                     A - T          T G
                    T     G T C C C     A
      T A A        A      | | | | |     G
    T       C T C G       C A G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     TGGTT
                    A - T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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