The detailed information of tRNA gene sequence


Sequence ID>SRA1000905
Genome IDSRR001049.70973
Search identical group
Phylum/ClassLine Islands Corals, viral fraction from water of Palmyra (SRP000141)
Species
Start position on genome 111
End posion on genome 35
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
nnnnnttaaa
tRNA gene sequence 
CGGGAAGTGGCGCAGTCTGGTAGCGCATCTGGTTTGGGACCAGAGGGTCGCAGGTTCGAA
TCCTGTCTTCCCGACCA
Downstream region at tRNA end position 
tttaaaggag
Secondary structure (Cloverleaf model)
>SRA1000905	Pro	TGG
                   a      ACCA tttaaaggag
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     T G T C C     A
      T G A        G      + | | | |     G
    C       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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