The detailed information of tRNA gene sequence


Sequence ID>SRA1000910
Genome IDSRR001049.105426
Search identical group
Phylum/ClassLine Islands Corals, viral fraction from water of Palmyra (SRP000141)
Species
Start position on genome 12
End posion on genome 83
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
aaataattaa
tRNA gene sequence 
AGGAGGTTAGCTCAGTTGGAGAGCATCTCGCTTACACCGAGACGGTCGCTGGTTCGAGTC
CAGTACCTCCTAtgt
Downstream region at tRNA end position 
tccgggctct
Secondary structure (Cloverleaf model)
>SRA1000910	Val	TAC
                   a      Atgt tccgggctct
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T - A          T G
                    T     T G A C C     A
        G A        A      + | | | |     G
      T     C T C G       G C T G G     C
      T     | | | |                 T T
      G     G A G C
        G A        A     CGGTC
                    T - A
                    C - G
                    T - A
                    C - G
                    G - C
                  C       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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