The detailed information of tRNA gene sequence


Sequence ID>SRA1000935
Genome IDSRR001049.208526
Search identical group
Phylum/ClassLine Islands Corals, viral fraction from water of Palmyra (SRP000141)
Species
Start position on genome 85
End posion on genome 11
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
agcgtaaaat
tRNA gene sequence 
GGATCGGTAGTTCAGTTGGTTAGAATGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAG
TCCCGTCCGGTCCGCag
Downstream region at tRNA end position 
aaagtctcnn
Secondary structure (Cloverleaf model)
>SRA1000935	Asp	GTC
                   t      GCag aaagtctcnn
                     G - C
                     G - C
                     A - T
                     T + G
                     C - G
                     G - C
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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