The detailed information of tRNA gene sequence


Sequence ID>SRA1000943
Genome IDSRR001049.246817
Search identical group
Phylum/ClassLine Islands Corals, viral fraction from water of Palmyra (SRP000141)
Species
Start position on genome 109
End posion on genome 33
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
nnntatattt
tRNA gene sequence 
GCTCCCGTAGCTCAGTTGGTTAGAGCAGGCGGCTCATAACCGCTCGGTCGTAGGTTCAAG
TCCTACCGGGAGTACCA
Downstream region at tRNA end position 
aaggagatta
Secondary structure (Cloverleaf model)
>SRA1000943	Met	CAT
                   t      ACCA aaggagatta
                     G + T
                     C - G
                     T - A
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     C A T C C     A
      T G A        A      | | | | |     A
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     CGGTC
                    G + T
                    G - C
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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