The detailed information of tRNA gene sequence


Sequence ID>SRA1000944
Genome IDSRR001049.248172
Search identical group
Phylum/ClassLine Islands Corals, viral fraction from water of Palmyra (SRP000141)
Species
Start position on genome 98
End posion on genome 12
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
cggttgttga
tRNA gene sequence 
GGCACCGTGGCGGAATTGGTATACGCAACGGACTTAAAATCCGTCGCCCTGACGGGATTG
AGGGTTCGAGTCCCTCCGGTGCTACCA
Downstream region at tRNA end position 
attactttaa
Secondary structure (Cloverleaf model)
>SRA1000944	Leu	TAA
                   a      ACCA attactttaa
                     G + T
                     G - C
                     C - G
                     A - T
                     C - G
                     C - G
                     G - C          T G
                    T     C T C C C     A
      T A A        G      | | | | |     G
    T       G G C G       G A G G G     C
    G         | | |                 T T
    G       A C G C
      T A T        A     CGCCCTGACGGGATT
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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