The detailed information of tRNA gene sequence


Sequence ID>SRA1000945
Genome IDSRR001049.255205
Search identical group
Phylum/ClassLine Islands Corals, viral fraction from water of Palmyra (SRP000141)
Species
Start position on genome 109
End posion on genome 36
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ataaataagg
tRNA gene sequence 
CGCGGGGTAGCCAAGTGGTAAGGCAGGTCTCTGCAAAAGACCTATCGTCGGTTCGATTCC
GACCCTCGCGTCCA
Downstream region at tRNA end position 
taattttaat
Secondary structure (Cloverleaf model)
>SRA1000945	Cys	GCA
                   g      TCCA taattttaat
                     C - G
                     G - C
                     C - G
                     G - C
                     G + T
                     G - C
                     G - C          T T
                    T     C A G C C     A
        G A        A      | | | | |     G
      T     A C C G       G T C G G     C
      G       | | |                 T T
      G     A G G C
        T A        A     TATC
                    G - C
                    G - C
                    T - A
                    C - G
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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