The detailed information of tRNA gene sequence


Sequence ID>SRA1000958
Genome IDSRR001049.333312
Search identical group
Phylum/ClassLine Islands Corals, viral fraction from water of Palmyra (SRP000141)
Species
Start position on genome 12
End posion on genome 86
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
cgcaacatga
tRNA gene sequence 
TCCGGGGTAGTTCAATGGTAGAACGTCCGACTGTTAATCGGGTGGTTGTTGGTTCGAGTC
CAGCTCCCGGAGCCA
Downstream region at tRNA end position 
aaaaaancgc
Secondary structure (Cloverleaf model)
>SRA1000958	Asn	GTT
                   a      GCCA aaaaaancgc
                     T - A
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T          T G
                    T     C G A C C     A
        A A        A      | + | | |     G
      T     C T T G       G T T G G     C
      G     | | | |                 T T
      G     G A A C
        T A        G     TGGTT
                    T + G
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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