The detailed information of tRNA gene sequence


Sequence ID>SRA1000960
Genome IDSRR001049.345530
Search identical group
Phylum/ClassLine Islands Corals, viral fraction from water of Palmyra (SRP000141)
Species
Start position on genome 19
End posion on genome 95
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
acatcaaaac
tRNA gene sequence 
GGACCCTTAGCTCAGTTGGTTAGAGCATCCGACTCATAATCGGCAGGTCCAAGGTTCAAG
TCCTTGAGGGTCCACCA
Downstream region at tRNA end position 
tttaacaaaa
Secondary structure (Cloverleaf model)
>SRA1000960	Met	CAT
                   c      ACCA tttaacaaaa
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     C - G
                     T - A          T G
                    T     G T T C C     A
      T G A        A      | | | | |     A
    T       C T C G       C A A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTC
                    T   C
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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