The detailed information of tRNA gene sequence


Sequence ID>SRA1000961
Genome IDSRR001050.10656
Search identical group
Phylum/ClassLine Islands Corals microbial fraction from water of Fanning (SRP000142)
Species
Start position on genome 37
End posion on genome 111
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
attgaaagat
tRNA gene sequence 
CGGGATGTGGCGCAGCTTGGTAGCGCACCTGTTTTGGGTACAGGGGGCCGGCAGGTTCAA
ATCCTGTCATCCCGNnnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1000961	Pro	TGG
                   t      Nnnn nnnnnnnnnn
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     T G T C C     A
      C G A        G      + | | | |     A
    T       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGCCG
                    C - G
                    C - G
                    T - A
                    G - C
                    T - A
                  T       T
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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