The detailed information of tRNA gene sequence


Sequence ID>SRA1000963
Genome IDSRR001050.184136
Search identical group
Phylum/ClassLine Islands Corals microbial fraction from water of Fanning (SRP000142)
Species
Start position on genome 37
End posion on genome 111
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
attgaaagat
tRNA gene sequence 
CGGGATGTGGCGCAGCTTGGTAGCGCACCTGTTTTGGGTACAGGGGNCCGGCAGGTTCAA
ATCCTGTCATCCCGTnnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1000963	Pro	TGG
                   t      Tnnn nnnnnnnnnn
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     T G T C C     A
      C G A        G      + | | | |     A
    T       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGNCCG
                    C - G
                    C - G
                    T - A
                    G - C
                    T - A
                  T       T
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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