The detailed information of tRNA gene sequence


Sequence ID>SRA1000967
Genome IDSRR001051.1092
Search identical group
Phylum/ClassLine Islands Corals viral fraction from water of Fanning (SRP000143)
Species
Start position on genome 39
End posion on genome 115
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
ccgaccattt
tRNA gene sequence 
GGTTCCGTAGCTCAGTTGGATAGAGCAACGGCCTTCTAAGCCGTGGGTCGCAGGTTCGAA
TCCTGCCGGAATCGCCA
Downstream region at tRNA end position 
aggagnnnnn
Secondary structure (Cloverleaf model)
>SRA1000967	Arg	TCT
                   t      GCCA aggagnnnnn
                     G - C
                     G + T
                     T - A
                     T - A
                     C - G
                     C - G
                     G - C          T A
                    T     C G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     GGGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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