The detailed information of tRNA gene sequence


Sequence ID>SRA1000977
Genome IDSRR001051.48274
Search identical group
Phylum/ClassLine Islands Corals viral fraction from water of Fanning (SRP000143)
Species
Start position on genome 7
End posion on genome 84
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
nnnttttttG
tRNA gene sequence 
GGTCCTTTAGTTCAGTTGGTCAGAGCACCCCGCTCATAACGGGAGAGTCGTCGGTTCAAG
TCCGACAAGGCCCACCA
Downstream region at tRNA end position 
tttaacatag
Secondary structure (Cloverleaf model)
>SRA1000977	Met	CAT
                   G      ACCA tttaacatag
                     G - C
                     G - C
                     T   C
                     C - G
                     C - G
                     T - A
                     T - A          T G
                    T     C A G C C     A
      T G A        A      | | | | |     A
    T       C T T G       G T C G G     C
    G       | | + |                 T T
    G       G A G C
      T C A        A     GAGTC
                    C   A
                    C - G
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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