The detailed information of tRNA gene sequence


Sequence ID>SRA1000979
Genome IDSRR001051.55328
Search identical group
Phylum/ClassLine Islands Corals viral fraction from water of Fanning (SRP000143)
Species
Start position on genome 113
End posion on genome 37
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
cccttctttt
tRNA gene sequence 
GGGTCTCTGGTGTAACGGATTAGCACACTTGGCTCTTAACCAAGCCGGTCTCGGTTCAAA
TCCGAGGGGACCCACTA
Downstream region at tRNA end position 
aataaaaaga
Secondary structure (Cloverleaf model)
>SRA1000979	Lys	CTT
                   t      ACTA aataaaaaga
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     T + G
                     C - G          T A
                    T     G A G C C     A
      C A A        G      | | | | |     A
    G       T G T G       C T C G G     C
    G       + | | |                 T T
    A       G C A C
      T T A        A     CCGGT
                    C - G
                    T - A
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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