The detailed information of tRNA gene sequence


Sequence ID>SRA1000980
Genome IDSRR001051.64635
Search identical group
Phylum/ClassLine Islands Corals viral fraction from water of Fanning (SRP000143)
Species
Start position on genome 18
End posion on genome 94
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
tatttttcac
tRNA gene sequence
GGGCTCTTAGCTCAGTTGGTCAGAGCACCTCGCTCATAACGGGATGGTCCTCGGTTCAAG
CCCGAGAGAGCCCACCA
Downstream region at tRNA end position
ttttannnnn
Secondary structure (Cloverleaf model)
>SRA1000980	Met	CAT
                   c      ACCA ttttannnnn
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     T - A          C G
                    T     G A G C C     A
      T G A        A      | | | | |     A
    T       C T C G       C T C G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        A     TGGTC
                    C   A
                    C - G
                    T + G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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