The detailed information of tRNA gene sequence


Sequence ID>SRA1000981
Genome IDSRR001051.65445
Search identical group
Phylum/ClassLine Islands Corals viral fraction from water of Fanning (SRP000143)
Species
Start position on genome 92
End posion on genome 19
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
nnnnntatat
tRNA gene sequence 
GTGCAAGTGTCTGAATGGTTTAGGTCCCAGTCTGCAAAACTGTGGTATGTCAGTTCGAAT
CTGACCTTGCACTCtt
Downstream region at tRNA end position 
accttctacc
Secondary structure (Cloverleaf model)
>SRA1000981	Cys	GCA
                   t      TCtt accttctacc
                     G - C
                     T - A
                     G - C
                     C - G
                     A - T
                     A - T
                     G - C          T A
                    T     C A G T C     A
      T A A        G      | | | | |     G
    G       G T C T       G T C A G     C
    G         + |                   T T
    T       A G G T
      T T          C     GGTAT
                    C   T
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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