The detailed information of tRNA gene sequence


Sequence ID>SRA1001016
Genome IDSRR001051.235429
Search identical group
Phylum/ClassLine Islands Corals viral fraction from water of Fanning (SRP000143)
Species
Start position on genome 18
End posion on genome 94
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tatttttcac
tRNA gene sequence 
GGGCTCTTAGCTCAGTTGGTCAGAGCACCTCGCTCATAACGGGATGGTCCTCGGTTCAAG
CCCGAGAGAGCCCACCA
Downstream region at tRNA end position 
ttttatagga
Secondary structure (Cloverleaf model)
>SRA1001016	Met	CAT
                   c      ACCA ttttatagga
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     T - A          C G
                    T     G A G C C     A
      T G A        A      | | | | |     A
    T       C T C G       C T C G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        A     TGGTC
                    C   A
                    C - G
                    T + G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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