The detailed information of tRNA gene sequence


Sequence ID>SRA1001025
Genome IDSRR001051.302272
Search identical group
Phylum/ClassLine Islands Corals viral fraction from water of Fanning (SRP000143)
Species
Start position on genome 100
End posion on genome 24
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
nnggtattaa
tRNA gene sequence 
GCACCCTTAGCTCAGTTGGATAGAGCATCGGCCTTCTAAGCCGAGGGTCGTAGGTTCGAG
CCCTACAGGGTGTACCA
Downstream region at tRNA end position 
tttacgcgga
Secondary structure (Cloverleaf model)
>SRA1001025	Arg	TCT
                   a      ACCA tttacgcgga
                     G + T
                     C - G
                     A - T
                     C - G
                     C - G
                     C - G
                     T - A          C G
                    T     C A T C C     A
      T G A        A      | | | | |     G
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     GGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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