The detailed information of tRNA gene sequence


Sequence ID>SRA1001030
Genome IDSRR001051.335418
Search identical group
Phylum/ClassLine Islands Corals viral fraction from water of Fanning (SRP000143)
Species
Start position on genome 87
End posion on genome 12
Amino Acid Ile
Anticodon TAT
Upstream region at tRNA start position 
taccattttt
tRNA gene sequence 
GCGGATGTAGCTCAGTGGTAAGAGCAGTCGTCTTATATGCGATTGGTCGCAGGTTCAAAT
CCTGCCATCCGTACCA
Downstream region at tRNA end position 
ctttatgtaa
Secondary structure (Cloverleaf model)
>SRA1001030	Ile	TAT
                   t      ACCA ctttatgtaa
                     G + T
                     C - G
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     C G T C C     A
      T G A        A      | | | | |     A
    G       C T C G       G C A G G     C
    G       | | | |                 T T
    T       G A G C
      A A          A     TGGTC
                    G + T
                    T - A
                    C - G
                    G - C
                    T + G
                  C       T
                  T       A
                    T A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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