The detailed information of tRNA gene sequence


Sequence ID>SRA1001053
Genome IDSRR001052.38275
Search identical group
Phylum/ClassCorals, microbial fraction from Porites astreoides tissues (SRP000144)
Species
Start position on genome 52
End posion on genome 123
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gtacctttag
tRNA gene sequence 
AGAAGATTAGGTTAGTGGTAGACCAAGGGCCTTCAAAGTTTTAAGTCGTTGGTTCGATTC
CAGCATCTTCTGggn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1001053	SeC	TCA
                   g      Gggn nnnnnnnnnn
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     T - A          T T
                    T     C G A C C     A
        G A        A      | + | | |     G
      T     T T G G       G T T G G     C
      G     + | | |                 T T
      G     G A C C
        T A        A     AAGTC
                    A - T
                    G + T
                    G + T
                    G + T
                    C - G
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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